BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014B12SP1|AL426650
(768 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1362 369 e-102
>3x_Contig1362
Length = 8864
Score = 369 bits (174), Expect = e-102
Identities = 190/200 (95%)
Strand = Plus / Minus
Query: 569 tttaaataattccaamacaattmtamaammgttgattgaatgtcacaggagccgagtcac 628
||||||||||| || | |||| || || ||||||||||||||||||||||||||||||
Sbjct: 3570 tttaaataattggaacagaattctacaaccgttgattgaatgtcacaggagccgagtcac 3511
Query: 629 camtatatatcgagtaccttttacctgtctatgtctatatctagtacccgtatattaact 688
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3510 cactatatatcgagtaccttttacctgtctatgtctatatctagtacccgtatattaact 3451
Query: 689 atcaacggaacagggaaagaggcaaaaaaaaaaaaaaaaaagttgaaaaamaaataaaac 748
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 3450 atcaacggaacagggaaagaggcaaaaaaaaaaaaaaaaaagttgaaaaacaaataaaac 3391
Query: 749 taaatcatttgaaaactaaa 768
||||||||||||||||||||
Sbjct: 3390 taaatcatttgaaaactaaa 3371
Score = 157 bits (74), Expect = 3e-38
Identities = 86/90 (95%)
Strand = Plus / Minus
Query: 1 ttctttctgtacattattttacaacatacccatcagtttgtattttatattttcataggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4134 ttctttctgtacattattttacaacatacccatcagtttgtattttatattttcataggt 4075
Query: 61 tttaaagattaataaaatatatattttttt 90
||||| |||||||| |||||| |||||||
Sbjct: 4074 tttaacgattaatacaatataacttttttt 4045
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.47 0.725 1.39
Gapped
Lambda K H
1.47 0.725 1.39
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 16,782
Number of Sequences: 1807
Number of extensions: 16782
Number of successful extensions: 4607
Number of sequences better than 1.0e-20: 1
length of query: 768
length of database: 10,358,551
effective HSP length: 15
effective length of query: 753
effective length of database: 10,331,446
effective search space: 7779578838
effective search space used: 7779578838
T: 0
A: 40
X1: 5 (10.6 bits)
X2: 14 (29.7 bits)
S1: 11 (23.8 bits)
S2: 47 (100.2 bits)